Department Publications

Author:

Dennis Della Corte, All Years

2022

21. MILCDock: Machine Learning Enhanced Consensus Docking for Virtual Screening in Drug Discovery

    Connor J. Morris^‡, Jacob A. Stern^†, Brenden Stark^‡, Max Christopherson^‡, and Dennis Della Corte

    J. Chem Inf. Model. 62 (22), 5342-5350 (2022).
    Journal
    
22. Student-Created Video Content for Assessment and Experiential Learning

    Ben Graul^‡, Matthew L. Rollins^‡, Nathan Powers, and Dennis Della Corte

    Phys. Teach. 60 (6), 491-495 (2022).
    Journal
    
23. Training undergraduate research assistants with an outcome-oriented and skill-based mentoring strategy

    Dennis Della Corte, Connor J. Morris^‡, Wendy M. Billings^‡, Jacob Stern^‡, Austin J. Jarrett^‡, Bryce Hedelius^†, and Adam Bennion

    Acta Crystallogr. Sect. D-Struct. Biol. 78 (8), (2022).
    Journal
    
24. Computational methods to simulate molten salt thermophysical properties

    Talmage Porter^‡, Michael M. Vaka^‡, Parker Steenblik^‡, and Dennis Della Corte

    Comm. Chem. 5 (1), 69 (2022).
    Journal
    
25. Self-reporting data assets and their representation in the pharmaceutical industry

    Dennis Della Corte, Wolfgang Colsman, Heiko Fessenmayr, Alexandre Sawczuk da Silva, and Dana E. Vanderwall

    Drug Discov. Today 27 (1), 207-214 (2022).
    Journal
    

2021

16. Learning Small Molecule Energies and Interatomic Forces with an Equivariant Transformer on the ANI-1x Dataset

    Bryce Hedelius^‡, Fabian B. Fuchs, and Dennis Della Corte

    ELLIS Machine Learning for Molecule Discovery Workshop (2021).
    Proceedings
    
17. Evaluation of Deep Neural Network ProSPr for Accurate Protein Distance Predictions on CASP14 Targets

    Jacob Stern^†, Bryce Hedelius^‡, Olivia Fisher^‡, Wendy M. Billings^‡, and Dennis Della Corte

    Int. J. Mol. Sci. 22, 12835 (2021).
    Journal
    
18. Delivering Digital Transformation with Self-reporting Data Assets

    Dennis Della Corte, Naomi Young^‡, and Karen A. Della Corte

    Proceedings of the Future Technologies Conference (FTC) 2021, Volume 1. FTC 2021. Lecture Notes in Networks and Systems, vol 358. Springer, Cham.
    Proceedings
    
19. Modeling SARS-CoV2 proteins in the CASP-commons experiment

    Andriy Kryshtafovych, John Moult, Wendy M. Billings^‡, Dennis Della Corte, Krzysztof Fidelis, Sohee Kwon, … (4 other authors)

    Proteins: Struct., Funct., Bioinf. , (2021).
    Journal
    
20. The Data-Centric Lab: A Pharmaceutical Perspective

    Dennis Della Corte and Karen A. Della Corte

    Proceedings of the 2021 Future of Information and Communication Conference (FICC), pp 1-15, (2021).
    Proceedings
    
21. The whole is greater than its parts: ensembling improves protein contact prediction

    Wendy M. Billings^‡, Connor J. Morris^‡, and Dennis Della Corte

    Sci. Rep. 11 (1), 8039 (2021).
    Journal
    
22. Coming of age of allotrope: proceedings from the Fall 2020 Allotrope Connect

    Todd Millecam^‡, Austin J. Jarrett^‡, Naomi Young^‡, Dana E. Vanderwall, and Dennis Della Corte

    Drug Discov. Today 26 (8), 1922-1928 (2021).
    Journal
    
23. Using molecular docking and molecular dynamics to investigate protein-ligand interactions

    Connor J. Morris^‡ and Dennis Della Corte

    Mod. Phys. Lett. B 35 (8), 2130002 (2021).
    Journal
    
24. Current computational methods for enzyme design

    Talmage L. Coates^‡, Naomi Young^‡, Austin J. Jarrett^‡, Connor J. Morris^‡, James D. Moody, and Dennis Della Corte

    Mod. Phys. Lett. B 35 (9), 2150155 (2021).
    Journal
    

2020

7. World trends in sugar-sweetened beverage and dietary sugar intakes in children and adolescents: a systematic review

   Karen Della Corte, Jessica Fife^†, Alexis Gardner, Britta L Murphy^†, Linda Kleis, Dennis Della Corte, … (3 other authors)

   Nutr. Rev. 79 (3), 274-288 (2020).
   Journal
   
8. Engineering and application of a biosensor with focused ligand specificity

   Dennis Della Corte, Hugo L. van Beek, Falk Syberg, Marcus Schallmey, Felix Tobola, Kai U. Cormann, … Connor J. Morris^‡, … (8 other authors)

   Nat. Commun. 11 (1), 4851 (2020).
   Journal
   
9. Context-dependent stabilizing interactions among solvent-exposed residues along the surface of a trimeric helix bundle

   Kimberlee L. Stern^†, Mason S. Smith^†, Wendy M. Billings^‡, Taylor J. Loftus^‡, Benjamin M. Conover^‡, Dennis Della Corte, and Joshua L. Price

   Biochemistry 59 (17), 1672-1679 (2020).
   Journal
   
10. Library eArchiving with ZONTAL Space and the Allotrope Data Format

    Dennis Della Corte, Wolfgang Colsman, Ben Welker, and Brian Rennick

    Digital Library Perspectives 36 (1), (2020).
    Journal
    

2018

3. Integrated NMR, Fluorescence and MD Benchmark Study of Protein Mechanics and Hydrodynamics

   Christina Möckel, Jakub Kubiak, Oliver Schillinger, Ralf Kuehnemuth, Dennis Della Corte, Gunnar F. Schröder, … (4 other authors)

   J. Phys. Chem. B 123 (7), 1453-1480 (2018).
   Journal
   

2015

2. Coupling an Ensemble of Homologues Improves Refinement of Protein Homology Models

   André Wildberg, Dennis Della Corte, and Gunnar F. Schröder

   J. Chem. Theory Comput. 11 (12), 5578-5582 (2015).
   Journal
   
3. Protein structure refinement with adaptively restrained homologous replicas

   Dennis Della Corte, André Wildberg, and Gunnar F. Schröder

   Eleventh Meeting on the Critical Assessment of Techniques for Protein Structure Prediction (September 2016). Proteins: Struct., Funct., Bioinf. 84 (S1), (2015).
   Journal
   

^‡Undergraduate Student Author

^†Graduate Student Author